Login
Help

GENE CARD

Submit your Data

Gene Card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA10YC02

Plate: Plate_10_C02

AHC0AAA13YI15

Plate: Plate_13_I15

AHC0AAA15YJ22

Plate: Plate_15_J22

AHC0AAA17YA17

Plate: Plate_17_A17

AHC0AAA55YC20

Plate: Plate_55_C20

AHC0AAA58YP22

Plate: Plate_58_P22

AHC0AAA67YD18

Plate: Plate_67_D18

AHC0AAA116YB03

Plate: Plate_116_B03

AHC0AAA133YA07

Plate: Plate_133_A07

AHC0AAA137YI18

Plate: Plate_137_I18

AHC0AAA150YB19

Plate: Plate_150_B19

AHC0AAA150YC02

Plate: Plate_150_C02

AHC0AAA133YA05

Plate: Plate_133_A05

AHC0AAA191YF05

Plate: Plate_191_F05

AHC0AAA213YO15

Plate: Plate_213_O15

AHC0AAA227YA08

Plate: Plate_227_A08

AHC0AAA230YA22

Plate: Plate_230_A22

AHC0AAA242YN22

Plate: Plate_242_N22

AHC0AAA55YC18

Plate: Plate_55_C18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Rpn13/ADRM1 PANTHER Proteasomal ubiquitin receptor Rpn13/ADRM1
RPN13_C Pfam UCH-binding domain
Rpn13/ADRM1 Pfam Proteasomal ubiquitin receptor Rpn13/ADRM1
RPN13_C_sf Gene3D UCH-binding domain superfamily
Rpn13/ADRM1_sf Gene3D Proteasomal ubiquitin receptor Rpn13/ADRM1 superfamily

GOSlim

18 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
membrane Orthology cellular component
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
enzyme binding Orthology molecular function
transcription from RNA polymerase II promoter Orthology biological process
proteolysis Orthology biological process
endopeptidase activity Orthology molecular function
positive regulation of hydrolase activity Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
enzyme activator activity Orthology molecular function
macromolecular complex binding Orthology molecular function

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
proteasome complex Hs cellular component
protease binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
transcription elongation from RNA polymerase II promoter Hs biological process
ubiquitin-dependent protein catabolic process Hs biological process
proteasome regulatory particle, lid subcomplex Hs cellular component
positive regulation of endopeptidase activity Hs biological process
membrane Hs cellular component
protein deubiquitination Hs biological process
ubiquitin binding Hs molecular function
proteasome assembly Hs biological process
endopeptidase activator activity Hs molecular function
proteasome binding Hs molecular function

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
proteasome complex Hs cellular component 230 1.78e-72
protease binding Hs molecular function 230 1.78e-72
protein binding Hs molecular function 230 1.78e-72
nucleus Hs cellular component 230 1.78e-72
nucleoplasm Hs cellular component 230 1.78e-72
cytoplasm Hs cellular component 230 1.78e-72
cytosol Hs cellular component 230 1.78e-72
plasma membrane Hs cellular component 230 1.78e-72
integral component of plasma membrane Hs cellular component 230 1.78e-72
proteasome regulatory particle, lid subcomplex Hs cellular component 230 1.78e-72
membrane Hs cellular component 230 1.78e-72
ubiquitin binding Hs molecular function 230 1.78e-72
endopeptidase activator activity Hs molecular function 230 1.78e-72
proteasome binding Hs molecular function 230 1.78e-72

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleus PANTHER cellular component 4.8E-109
cytoplasm PANTHER cellular component 4.8E-109