- Gene 'Phmamm.CG.MTP2014.S4...'
Gene Card
Best human hits
SRSF12; SRSF2; SRSF8
Species
Unique Gene ID
Phmamm.g00008436
Gene Model ID
Phmamm.CG.MTP2014.S413.g08436
Location
S413:7609..8905
Transcript Models and Sequences
AHC0AAA2YG04
Plate: Plate_2_G04
AHC0AAA24YC12
Plate: Plate_24_C12
AHC0AAA6YH17
Plate: Plate_6_H17
AHC0AAA28YP07
Plate: Plate_28_P07
AHC0AAA31YO23
Plate: Plate_31_O23
AHC0AAA55YN21
Plate: Plate_55_N21
AHC0AAA57YO03
Plate: Plate_57_O03
AHC0AAA73YE06
Plate: Plate_73_E06
AHC0AAA79YK10
Plate: Plate_79_K10
AHC0AAA141YK06
Plate: Plate_141_K06
AHC0AAA150YG07
Plate: Plate_150_G07
AHC0AAA96YJ08
Plate: Plate_96_J08
AHC0AAA173YD12
Plate: Plate_173_D12
AHC0AAA174YA18
Plate: Plate_174_A18
AHC0AAA190YL18
Plate: Plate_190_L18
AHC0AAA252YL12
Plate: Plate_252_L12
AHC0AAA55YP23
Plate: Plate_55_P23
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
IPR Term | Analysis | Definition |
---|---|---|
RRM_dom | Pfam | RNA recognition motif domain |
RRM_dom | SMART | RNA recognition motif domain |
Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
RRM_dom | ProSiteProfiles | RNA recognition motif domain |
GO Term | Annotation Origin | Type |
---|---|---|
mRNA splicing, via spliceosome | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
transcription corepressor activity | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
cytosol | Orthology | cellular component |
mRNA processing | Orthology | biological process |
RNA splicing | Orthology | biological process |
nuclear speck | Orthology | cellular component |
unfolded protein binding | Blast | molecular function |
extracellular exosome | Orthology | cellular component |
negative regulation of nucleic acid-templated transcription | Orthology | biological process |
regulation of gene expression | Orthology | biological process |
protein kinase binding | Orthology | molecular function |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
transcription from RNA polymerase II promoter | Orthology | biological process |
organic substance transport | Orthology | biological process |
intracellular transport | Orthology | biological process |
intracellular protein transport | Orthology | biological process |
gene expression | Orthology | biological process |
nuclear body | Orthology | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
mitotic cell cycle | Hs | biological process |
regulation of alternative mRNA splicing, via spliceosome | Hs | biological process |
mRNA splicing, via spliceosome | Hs | biological process |
nucleic acid binding | Hs | molecular function |
transcription corepressor activity | Hs | molecular function |
RNA binding | Hs | molecular function |
protein kinase C binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
spliceosomal complex | Hs | cellular component |
cytosol | Hs | cellular component |
termination of RNA polymerase II transcription | Hs | biological process |
mRNA processing | Hs | biological process |
RNA export from nucleus | Hs | biological process |
mRNA export from nucleus | Hs | biological process |
RNA splicing | Hs | biological process |
nuclear speck | Hs | cellular component |
mRNA 3'-end processing | Hs | biological process |
interchromatin granule | Hs | cellular component |
pre-mRNA binding | Hs | molecular function |
regulation of RNA splicing | Hs | biological process |
extracellular exosome | Hs | cellular component |
negative regulation of nucleic acid-templated transcription | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleic acid binding | Hs | molecular function | 160 | 1.17e-49 |
transcription corepressor activity | Hs | molecular function | 160 | 1.17e-49 |
RNA binding | Hs | molecular function | 160 | 1.17e-49 |
protein kinase C binding | Hs | molecular function | 160 | 1.17e-49 |
protein binding | Hs | molecular function | 160 | 1.17e-49 |
nucleus | Hs | cellular component | 160 | 1.17e-49 |
nucleoplasm | Hs | cellular component | 160 | 1.17e-49 |
spliceosomal complex | Hs | cellular component | 160 | 1.17e-49 |
cytosol | Hs | cellular component | 160 | 1.17e-49 |
nuclear speck | Hs | cellular component | 160 | 1.17e-49 |
interchromatin granule | Hs | cellular component | 160 | 1.17e-49 |
pre-mRNA binding | Hs | molecular function | 160 | 1.17e-49 |
RS domain binding | Hs | molecular function | 84.0 | 9.67e-20 |
unfolded protein binding | Hs | molecular function | 84.0 | 9.67e-20 |
extracellular exosome | Hs | cellular component | 160 | 1.17e-49 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | SUPERFAMILY | molecular function | 2.42E-31 |