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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

CRISPLD1; CRISPLD2; VIT

Species

P.mammillata

Unique Gene ID

Phmamm.g00005938

Gene Model ID

Phmamm.CG.MTP2014.S239.g05938

Location

S239:78698..87137

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S239.g05938.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA6YI18

Plate: Plate_6_I18

AHC0AAA33YK16

Plate: Plate_33_K16

AHC0AAA227YK19

Plate: Plate_227_K19

AHC0AAA250YC14

Plate: Plate_250_C14

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
LCCL ProSiteProfiles LCCL domain
LCCL_sf SUPERFAMILY LCCL domain superfamily
Vitrin PANTHER Vitrin
LCCL Pfam LCCL domain
LCCL_sf Gene3D LCCL domain superfamily
LCCL SMART LCCL domain

GOSlim

9 results

GO Term Annotation Origin Type
extracellular region Blast cellular component
extracellular exosome Blast cellular component
carbohydrate derivative binding Blast molecular function
extracellular region part Blast cellular component
anion binding Blast molecular function
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
glycosaminoglycan binding Hs molecular function 97.4 1.06e-21
extracellular region Hs cellular component 99.8 2.17e-22
proteinaceous extracellular matrix Hs cellular component 97.4 1.06e-21
interstitial matrix Hs cellular component 71.2 4.52e-13
heparin binding Hs molecular function 97.4 1.06e-21
transport vesicle Hs cellular component 97.4 1.06e-21
secretory granule lumen Hs cellular component 97.4 1.06e-21
extracellular exosome Hs cellular component 99.8 2.17e-22
ficolin-1-rich granule lumen Hs cellular component 97.4 1.06e-21

GO (InterProScan)

1 result

GO Term Analysis Type e-value
proteinaceous extracellular matrix PANTHER cellular component 2.4E-63