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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

CACHD1; CACNA2D1; CACNA2D4

Species

P.mammillata

Unique Gene ID

Phmamm.g00016419

Gene Model ID

Phmamm.CG.MTP2014.S2237.g16419

Location

S2237:494..8353

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2237.g16419.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA11YF15

Plate: Plate_11_F15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A
VWF_A SMART von Willebrand factor, type A

GOSlim

12 results

GO Term Annotation Origin Type
plasma membrane Blast cellular component
ion transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
transmembrane transport Blast biological process
metal ion transport Blast biological process
plasma membrane part Blast cellular component
macromolecular complex Blast cellular component
endoplasmic reticulum Blast cellular component
cell-cell signaling Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
voltage-gated ion channel activity Hs molecular function 119 6.65e-28
voltage-gated calcium channel activity Hs molecular function 119 6.65e-28
calcium channel activity Hs molecular function 119 6.65e-28
plasma membrane Hs cellular component 119 6.65e-28
voltage-gated calcium channel complex Hs cellular component 119 6.65e-28
membrane Hs cellular component 193 5.34e-52
integral component of membrane Hs cellular component 193 5.34e-52
sarcoplasmic reticulum Hs cellular component 114 4.12e-26
T-tubule Hs cellular component 114 4.12e-26
metal ion binding Hs molecular function 119 6.65e-28
extracellular exosome Hs cellular component 114 4.12e-26
voltage-gated calcium channel activity involved in cardiac muscle cell action potential Hs molecular function 114 4.12e-26
voltage-gated calcium channel activity involved in bundle of His cell action potential Hs molecular function 114 4.12e-26
L-type voltage-gated calcium channel complex Hs cellular component 114 4.12e-26

GO (InterProScan)

No result

GO Term Analysis Type e-value