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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S41...'

Gene Card

Best human hits

ABCD1; ABCD3; ABCD4

Species

M.occidentalis

Unique Gene ID

Moocci.g00012400

Gene Model ID

Moocci.CG.ELv1_2.S413272.g12400

Location

S413272:31026..33690

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S413272.g12400.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
ABC1_TM_sf SUPERFAMILY ABC transporter type 1, transmembrane domain superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ABC_transporter-like Pfam ABC transporter-like
ABC_transporter-like ProSiteProfiles ABC transporter-like
AAA+_ATPase SMART AAA+ ATPase domain
ABC1_TM_dom Pfam ABC transporter type 1, transmembrane domain
ABC_transporter_CS ProSitePatterns ABC transporter, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
ATP binding Hs molecular function
lysosomal membrane Hs cellular component
peroxisome Hs cellular component
peroxisomal membrane Hs cellular component
endoplasmic reticulum membrane Hs cellular component
cobalamin metabolic process Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
ATPase activity Hs molecular function
ATPase activity, coupled to transmembrane movement of substances Hs molecular function
ATP-binding cassette (ABC) transporter complex Hs cellular component
transmembrane transport Hs biological process

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 518 1.68e-178
transporter activity Hs molecular function 183 1.89e-49
long-chain fatty acid transporter activity Hs molecular function 205 9.83e-58
protein binding Hs molecular function 205 9.83e-58
ATP binding Hs molecular function 518 1.68e-178
cytoplasm Hs cellular component 183 1.89e-49
mitochondrion Hs cellular component 205 9.83e-58
mitochondrial inner membrane Hs cellular component 205 9.83e-58
lysosomal membrane Hs cellular component 518 1.68e-178
peroxisome Hs cellular component 518 1.68e-178
peroxisomal membrane Hs cellular component 518 1.68e-178
integral component of peroxisomal membrane Hs cellular component 183 1.89e-49
peroxisomal matrix Hs cellular component 205 9.83e-58
endoplasmic reticulum membrane Hs cellular component 518 1.68e-178
cytosol Hs cellular component 205 9.83e-58
membrane Hs cellular component 518 1.68e-178
integral component of membrane Hs cellular component 518 1.68e-178
ATPase activity Hs molecular function 518 1.68e-178
enzyme binding Hs molecular function 183 1.89e-49
ATPase activity, coupled to transmembrane movement of substances Hs molecular function 518 1.68e-178
identical protein binding Hs molecular function 183 1.89e-49
protein homodimerization activity Hs molecular function 205 9.83e-58
ATP-binding cassette (ABC) transporter complex Hs cellular component 518 1.68e-178
intracellular membrane-bounded organelle Hs cellular component 205 9.83e-58
protein self-association Hs molecular function 205 9.83e-58
perinuclear region of cytoplasm Hs cellular component 183 1.89e-49

GO (InterProScan)

5 results

GO Term Analysis Type e-value
ATP binding Pfam molecular function 8.2E-58
integral component of membrane Pfam cellular component 8.2E-58
ATPase activity Pfam molecular function 3.4E-17
ATPase activity, coupled to transmembrane movement of substances Pfam molecular function 8.2E-58
transmembrane transport Pfam biological process 8.2E-58