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GENE CARD

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  1. Gene 'KH2012:KH.L37.52'

Gene Card

Best human hits

BHMT; BHMT2; MTR

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012417

Gene Model ID

KH2012:KH.L37.52

Location

KhL37:138954..140463

Transcript Models and Sequences

  KH2012:KH.L37.52.v1.C.ND1-1
KH2012:KH.L37.52.v1.C.nonSL10-1
KH2012:KH.L37.52.v1.C.nonSL2-1
KH2012:KH.L37.52.v1.C.nonSL3-1
KH2012:KH.L37.52.v1.C.nonSL4-1
KH2012:KH.L37.52.v1.C.nonSL5-1
KH2012:KH.L37.52.v1.C.nonSL6-1
KH2012:KH.L37.52.v1.C.nonSL7-1
KH2012:KH.L37.52.v1.C.nonSL8-1
KH2012:KH.L37.52.v1.C.nonSL9-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

1 result

cien177585

Plate: VES97_J17

Gene collection 1 (N. Satoh)

1 result

cieg036m23

Plate: R1CiGC21k02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Betaine-hCys_S-MeTrfase_BHMT PIRSF Betaine-homocysteine S-methyltransferase, BHMT
HCY_dom Pfam Homocysteine-binding domain
HCY_dom_sf SUPERFAMILY Homocysteine-binding domain superfamily
HCY_dom ProSiteProfiles Homocysteine-binding domain
HCY_dom_sf Gene3D Homocysteine-binding domain superfamily

GOSlim

12 results

GO Term Annotation Origin Type
protein binding Blast molecular function
cytoplasm Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
transferase activity Blast molecular function
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
metabolic process Blast biological process
cellular biosynthetic process Blast biological process
small molecule binding Blast molecular function
tetrapyrrole binding Blast molecular function
cofactor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 36.2 0.010
cytoplasm Hs cellular component 197 2.32e-62
cytosol Hs cellular component 197 2.32e-62
methyltransferase activity Hs molecular function 197 2.32e-62
zinc ion binding Hs molecular function 197 2.32e-62
methionine synthase activity Hs molecular function 36.2 0.010
transferase activity Hs molecular function 197 2.32e-62
cobalamin binding Hs molecular function 36.2 0.010
metal ion binding Hs molecular function 197 2.32e-62
betaine-homocysteine S-methyltransferase activity Hs molecular function 197 2.32e-62
S-methylmethionine-homocysteine S-methyltransferase activity Hs molecular function 197 2.32e-62
extracellular exosome Hs cellular component 197 2.32e-62

GO (InterProScan)

4 results

GO Term Analysis Type e-value
cytoplasm PIRSF cellular component 4.5E-64
zinc ion binding PIRSF molecular function 4.5E-64
methionine biosynthetic process PIRSF biological process 4.5E-64
betaine-homocysteine S-methyltransferase activity PIRSF molecular function 4.5E-64

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