Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.C11.85'

Gene Card

Best human hits

BBOX1; TMLHE

Unique Gene ID

Cirobu.g00002607

Gene Model ID

KH2012:KH.C11.85

Location

KhC11:1480949..1486230

External Database Gene Card
Collections

Gateway full ORF

2 results

cien156454

Plate: VES94_P12

cien224530

Plate: VES104_K24

Gene collection 1 (N. Satoh)

1 result

cieg023l11

Plate: R1CiGC19c14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
TauD/TfdA-like Pfam TauD/TfdA-like domain
GBBH-like_N_sf Gene3D GBBH-like, N-terminal domain superfamily
GBH-like_N Pfam Gamma-butyrobetaine hydroxylase-like, N-terminal

GOSlim

12 results

GO Term Annotation Origin Type
iron ion binding Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
identical protein binding Blast molecular function
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
catalytic activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
iron ion binding Hs molecular function 99.8 1.72e-24
protein binding Hs molecular function 99.8 1.72e-24
cytoplasm Hs cellular component 99.8 1.72e-24
mitochondrion Hs cellular component 99.8 1.72e-24
mitochondrial matrix Hs cellular component 65.1 3.24e-12
cytosol Hs cellular component 99.8 1.72e-24
zinc ion binding Hs molecular function 99.8 1.72e-24
gamma-butyrobetaine dioxygenase activity Hs molecular function 99.8 1.72e-24
oxidoreductase activity Hs molecular function 99.8 1.72e-24
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Hs molecular function 65.1 3.24e-12
identical protein binding Hs molecular function 99.8 1.72e-24
metal ion binding Hs molecular function 99.8 1.72e-24
trimethyllysine dioxygenase activity Hs molecular function 65.1 3.24e-12
dioxygenase activity Hs molecular function 99.8 1.72e-24
extracellular exosome Hs cellular component 99.8 1.72e-24

GO (InterProScan)

2 results

GO Term Analysis Type e-value
oxidoreductase activity Pfam molecular function 3.7E-23
oxidation-reduction process Pfam biological process 3.7E-23