Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000005866
NCBI Reference Sequence	NM_001032436.1
NCBI Reference Sequence	XM_018816117.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

citb071j02

Plate: R1CiGC46a24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Pro_4_hyd_alph	SMART	Prolyl 4-hydroxylase, alpha subunit
Oxoglu/Fe-dep_dioxygenase	Pfam	Oxoglutarate/iron-dependent dioxygenase
Oxoglu/Fe-dep_dioxygenase	ProSiteProfiles	Oxoglutarate/iron-dependent dioxygenase
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily

GOSlim

25 results

GO Term	Annotation Origin	Type
iron ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
protein folding	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
membrane	Orthology	cellular component
macromolecular complex	Orthology	cellular component
macromolecular complex binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
extracellular region part	Orthology	cellular component
neuron projection development	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
metabolic process	Orthology	biological process
biosynthetic process	Orthology	biological process
protein transport	Orthology	biological process
animal organ development	Orthology	biological process

GO (Orthology)

33 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
iron ion binding	Hs	molecular function
protein binding	Hs	molecular function
collagen binding	Hs	molecular function
extracellular region	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
basement membrane	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
Golgi apparatus	Hs	cellular component
protein folding	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
positive regulation of neuron projection development	Hs	biological process
membrane	Hs	cellular component
oxidoreductase activity	Hs	molecular function
sarcoplasmic reticulum	Hs	cellular component
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Hs	molecular function
protein hydroxylation	Hs	biological process
peptidyl-proline hydroxylation	Hs	biological process
procollagen-proline 3-dioxygenase activity	Hs	molecular function
L-ascorbic acid binding	Hs	molecular function
collagen metabolic process	Hs	biological process
collagen biosynthetic process	Hs	biological process
macromolecular complex	Hs	cellular component
macromolecular complex binding	Hs	molecular function
metal ion binding	Hs	molecular function
regulation of protein secretion	Hs	biological process
protein stabilization	Hs	biological process
dioxygenase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
bone development	Hs	biological process
chaperone-mediated protein folding	Hs	biological process
extracellular exosome	Hs	cellular component
catalytic complex	Hs	cellular component

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
iron ion binding	Hs	molecular function	270	6.48e-80
protein binding	Hs	molecular function	270	6.48e-80
collagen binding	Hs	molecular function	258	8.68e-75
extracellular region	Hs	cellular component	258	8.68e-75
proteinaceous extracellular matrix	Hs	cellular component	258	8.68e-75
basement membrane	Hs	cellular component	270	6.48e-80
endoplasmic reticulum	Hs	cellular component	270	6.48e-80
endoplasmic reticulum lumen	Hs	cellular component	270	6.48e-80
Golgi apparatus	Hs	cellular component	270	6.48e-80
membrane	Hs	cellular component	258	8.68e-75
oxidoreductase activity	Hs	molecular function	270	6.48e-80
sarcoplasmic reticulum	Hs	cellular component	270	6.48e-80
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Hs	molecular function	270	6.48e-80
procollagen-proline 3-dioxygenase activity	Hs	molecular function	270	6.48e-80
L-ascorbic acid binding	Hs	molecular function	270	6.48e-80
macromolecular complex	Hs	cellular component	258	8.68e-75
macromolecular complex binding	Hs	molecular function	258	8.68e-75
metal ion binding	Hs	molecular function	270	6.48e-80
dioxygenase activity	Hs	molecular function	270	6.48e-80
extracellular exosome	Hs	cellular component	258	8.68e-75
catalytic complex	Hs	cellular component	229	1.02e-64

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
iron ion binding	SMART	molecular function	2.4E-46
protein binding	Gene3D	molecular function	2.0E-6
oxidoreductase activity	Pfam	molecular function	4.8E-11
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	SMART	molecular function	2.4E-46
L-ascorbic acid binding	SMART	molecular function	2.4E-46
oxidation-reduction process	SMART	biological process	2.4E-46

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences