Aniseed - Gene card

Gene 'KH2012:KH.C1.1004'

Gene Card

Best human hits

KATNA1; KATNAL1; KATNAL2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000008

Gene Model ID

KH2012:KH.C1.1004

Location

KhC1:2817172..2819319

Transcript Models and Sequences

KH2012:KH.C1.1004.v1.A.nonSL10-1
KH2012:KH.C1.1004.v1.A.nonSL2-1
KH2012:KH.C1.1004.v1.A.nonSL3-1
KH2012:KH.C1.1004.v1.A.nonSL4-1
KH2012:KH.C1.1004.v1.A.nonSL5-1
KH2012:KH.C1.1004.v1.A.nonSL7-1
KH2012:KH.C1.1004.v1.A.nonSL8-1
KH2012:KH.C1.1004.v1.A.nonSL9-1
KH2012:KH.C1.1004.v1.A.SL6-1
KH2012:KH.C1.1004.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005443
NCBI Reference Sequence	XM_009863895.2

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
ATPase_AAA_CS	ProSitePatterns	ATPase, AAA-type, conserved site
KATNA1	Hamap	Katanin p60 subunit A1
AAA+_ATPase	SMART	AAA+ ATPase domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_core	Pfam	ATPase, AAA-type, core

GOSlim

22 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytoskeleton	Orthology	cellular component
microtubule	Orthology	cellular component
cell cycle	Orthology	biological process
spermatogenesis	Orthology	biological process
microtubule binding	Orthology	molecular function
hydrolase activity	Orthology	molecular function
midbody	Orthology	cellular component
identical protein binding	Orthology	molecular function
protein heterodimerization activity	Orthology	molecular function
cell division	Orthology	biological process
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
microtubule-based process	Orthology	biological process
organelle organization	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
spindle pole	Hs	cellular component
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
spindle	Hs	cellular component
cytoskeleton	Hs	cellular component
microtubule	Hs	cellular component
cell cycle	Hs	biological process
spermatogenesis	Hs	biological process
microtubule binding	Hs	molecular function
microtubule-severing ATPase activity	Hs	molecular function
hydrolase activity	Hs	molecular function
ATPase activity	Hs	molecular function
midbody	Hs	cellular component
identical protein binding	Hs	molecular function
protein heterodimerization activity	Hs	molecular function
microtubule severing	Hs	biological process
cell division	Hs	biological process
mitotic spindle pole	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	572
spindle pole	Hs	cellular component	572
protein binding	Hs	molecular function	572
ATP binding	Hs	molecular function	572
nucleus	Hs	cellular component	572
cytoplasm	Hs	cellular component	572
centrosome	Hs	cellular component	558
microtubule organizing center	Hs	cellular component	572
spindle	Hs	cellular component	572
cytoskeleton	Hs	cellular component	572
microtubule	Hs	cellular component	572
microtubule binding	Hs	molecular function	572
microtubule-severing ATPase activity	Hs	molecular function	572
hydrolase activity	Hs	molecular function	572
ATPase activity	Hs	molecular function	558
midbody	Hs	cellular component	572
identical protein binding	Hs	molecular function	558
protein heterodimerization activity	Hs	molecular function	572
mitotic spindle pole	Hs	cellular component	572

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
ATP binding	Pfam	molecular function	6.3E-39
microtubule binding	Hamap	molecular function	36.539
microtubule-severing ATPase activity	Hamap	molecular function	36.539
microtubule severing	Hamap	biological process	36.539