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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

VPS36

Species

B.schlosseri

Unique Gene ID

Boschl.g00069057

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g69057

Location

chrUn:392847112..392851061

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g69057.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
GLUE_dom ProSiteProfiles Vacuolar protein sorting protein 36, GLUE domain
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Vps36 PANTHER Vacuolar protein sorting protein 36
PH-like_dom_sf Gene3D PH-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ESCRT II complex Hs cellular component 349 6.47e-120
protein binding Hs molecular function 349 6.47e-120
nucleus Hs cellular component 349 6.47e-120
cytoplasm Hs cellular component 349 6.47e-120
lysosome Hs cellular component 349 6.47e-120
endosome Hs cellular component 349 6.47e-120
late endosome Hs cellular component 349 6.47e-120
cytosol Hs cellular component 349 6.47e-120
protein C-terminus binding Hs molecular function 349 6.47e-120
lipid binding Hs molecular function 349 6.47e-120
membrane Hs cellular component 349 6.47e-120
late endosome membrane Hs cellular component 349 6.47e-120
phosphatidylinositol-3-phosphate binding Hs molecular function 349 6.47e-120
ubiquitin binding Hs molecular function 349 6.47e-120
extracellular exosome Hs cellular component 349 6.47e-120

GO (InterProScan)

4 results

GO Term Analysis Type e-value
ESCRT II complex PANTHER cellular component 1.0E-109
phosphatidylinositol-3-phosphate binding ProSiteProfiles molecular function 11.939
endosome transport via multivesicular body sorting pathway PANTHER biological process 1.0E-109
ubiquitin binding PANTHER molecular function 1.0E-109