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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

ALCAM; HMCN2; PXDN

Species

P.mammillata

Unique Gene ID

Phmamm.g00013416

Gene Model ID

Phmamm.CG.MTP2014.S1044.g13416

Location

S1044:38550..50540

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

63 results

AHC0AAA14YL21

Plate: Plate_14_L21

AHC0AAA19YA04

Plate: Plate_19_A04

AHC0AAA36YD11

Plate: Plate_36_D11

AHC0AAA42YD13

Plate: Plate_42_D13

AHC0AAA42YL15

Plate: Plate_42_L15

AHC0AAA43YF05

Plate: Plate_43_F05

AHC0AAA47YC12

Plate: Plate_47_C12

AHC0AAA47YI04

Plate: Plate_47_I04

AHC0AAA49YH09

Plate: Plate_49_H09

AHC0AAA51YM21

Plate: Plate_51_M21

AHC0AAA60YK17

Plate: Plate_60_K17

AHC0AAA62YJ12

Plate: Plate_62_J12

AHC0AAA64YL11

Plate: Plate_64_L11

AHC0AAA68YL17

Plate: Plate_68_L17

AHC0AAA73YJ15

Plate: Plate_73_J15

AHC0AAA74YH13

Plate: Plate_74_H13

AHC0AAA80YP08

Plate: Plate_80_P08

AHC0AAA100YN13

Plate: Plate_100_N13

AHC0AAA109YI09

Plate: Plate_109_I09

AHC0AAA109YJ24

Plate: Plate_109_J24

AHC0AAA114YD12

Plate: Plate_114_D12

AHC0AAA114YN05

Plate: Plate_114_N05

AHC0AAA116YF17

Plate: Plate_116_F17

AHC0AAA118YP20

Plate: Plate_118_P20

AHC0AAA119YE21

Plate: Plate_119_E21

AHC0AAA126YN06

Plate: Plate_126_N06

AHC0AAA128YP11

Plate: Plate_128_P11

AHC0AAA131YK20

Plate: Plate_131_K20

AHC0AAA134YE02

Plate: Plate_134_E02

AHC0AAA138YO03

Plate: Plate_138_O03

AHC0AAA139YL21

Plate: Plate_139_L21

AHC0AAA146YF23

Plate: Plate_146_F23

AHC0AAA147YC14

Plate: Plate_147_C14

AHC0AAA150YK17

Plate: Plate_150_K17

AHC0AAA151YB12

Plate: Plate_151_B12

AHC0AAA151YF09

Plate: Plate_151_F09

AHC0AAA97YP01

Plate: Plate_97_P01

AHC0AAA97YP13

Plate: Plate_97_P13

AHC0AAA99YN23

Plate: Plate_99_N23

AHC0AAA147YE16

Plate: Plate_147_E16

AHC0AAA160YE15

Plate: Plate_160_E15

AHC0AAA178YK15

Plate: Plate_178_K15

AHC0AAA185YB23

Plate: Plate_185_B23

AHC0AAA186YM02

Plate: Plate_186_M02

AHC0AAA188YB13

Plate: Plate_188_B13

AHC0AAA191YA03

Plate: Plate_191_A03

AHC0AAA192YJ06

Plate: Plate_192_J06

AHC0AAA202YM17

Plate: Plate_202_M17

AHC0AAA204YP06

Plate: Plate_204_P06

AHC0AAA209YA14

Plate: Plate_209_A14

AHC0AAA214YA19

Plate: Plate_214_A19

AHC0AAA221YI17

Plate: Plate_221_I17

AHC0AAA225YH09

Plate: Plate_225_H09

AHC0AAA229YK20

Plate: Plate_229_K20

AHC0AAA239YH14

Plate: Plate_239_H14

AHC0AAA239YP09

Plate: Plate_239_P09

AHC0AAA250YC20

Plate: Plate_250_C20

AHC0AAA255YO13

Plate: Plate_255_O13

AHC0AAA256YH16

Plate: Plate_256_H16

AHC0AAA258YF15

Plate: Plate_258_F15

AHC0AAA265YP07

Plate: Plate_265_P07

AHC0AAA268YK20

Plate: Plate_268_K20

AHC0AAA269YH20

Plate: Plate_269_H20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig_sub SMART Immunoglobulin subtype
Ig-like_dom Pfam Immunoglobulin-like domain
Ig_sub2 SMART Immunoglobulin subtype 2

GOSlim

34 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
heme binding Blast molecular function
cell junction Blast cellular component
axon Blast cellular component
intrinsic component of plasma membrane Blast cellular component
identical protein binding Blast molecular function
cell projection Blast cellular component
neuronal cell body Blast cellular component
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
plasma membrane part Blast cellular component
catalytic activity Blast molecular function
molecular function regulator Blast molecular function
cytokine-mediated signaling pathway Blast biological process
signaling receptor activity Blast molecular function
negative regulation of signal transduction Blast biological process
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
cell surface Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
immunological synapse Hs cellular component 77.0 9.56e-15
peroxidase activity Hs molecular function 69.3 4.02e-12
receptor binding Hs molecular function 77.0 9.56e-15
interleukin-1 receptor antagonist activity Hs molecular function 69.3 4.02e-12
extracellular matrix structural constituent Hs molecular function 69.3 4.02e-12
calcium ion binding Hs molecular function 69.3 5.34e-12
protein binding Hs molecular function 77.0 9.56e-15
extracellular region Hs cellular component 77.0 9.56e-15
proteinaceous extracellular matrix Hs cellular component 69.3 4.02e-12
basement membrane Hs cellular component 69.3 5.34e-12
extracellular space Hs cellular component 69.3 4.02e-12
endoplasmic reticulum Hs cellular component 69.3 4.02e-12
plasma membrane Hs cellular component 77.0 9.56e-15
integral component of plasma membrane Hs cellular component 77.0 9.56e-15
focal adhesion Hs cellular component 77.0 9.56e-15
cell cortex Hs cellular component 69.3 5.34e-12
external side of plasma membrane Hs cellular component 77.0 9.56e-15
membrane Hs cellular component 77.0 9.56e-15
integral component of membrane Hs cellular component 77.0 9.56e-15
oxidoreductase activity Hs molecular function 69.3 4.02e-12
heme binding Hs molecular function 69.3 4.02e-12
cell junction Hs cellular component 69.3 5.34e-12
axon Hs cellular component 77.0 9.56e-15
dendrite Hs cellular component 77.0 9.56e-15
extracellular matrix Hs cellular component 69.3 4.02e-12
intrinsic component of plasma membrane Hs cellular component 77.0 9.56e-15
cleavage furrow Hs cellular component 69.3 5.34e-12
T cell receptor complex Hs cellular component 77.0 9.56e-15
identical protein binding Hs molecular function 77.0 9.56e-15
cell projection Hs cellular component 77.0 9.56e-15
neuronal cell body Hs cellular component 77.0 9.56e-15
metal ion binding Hs molecular function 69.3 4.02e-12
extracellular exosome Hs cellular component 77.0 9.56e-15

GO (InterProScan)

No result

GO Term Analysis Type e-value