Gene Card
Best human hits
LDLR; LRP1B; LRP8
Species
Unique Gene ID
Cisavi.g00002871
Gene Model ID
Cisavi.CG.ENS81.R16.2236661-2241567
Location
R16:2236660..2241567
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| LDrepeatLR_classA_rpt | Pfam | Low-density lipoprotein (LDL) receptor class A repeat |
| LDrepeatLR_classA_rpt | CDD | Low-density lipoprotein (LDL) receptor class A repeat |
| LDrepeatLR_classA_rpt | SMART | Low-density lipoprotein (LDL) receptor class A repeat |
| LDrepeatLR_classA_rpt | ProSiteProfiles | Low-density lipoprotein (LDL) receptor class A repeat |
| LDL_receptor-like_sf | SUPERFAMILY | LDL receptor-like superfamily |
| LDLR_class-A_CS | ProSitePatterns | Low-density lipoprotein (LDL) receptor class A, conserved site |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
46 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| amyloid-beta binding | Hs | molecular function | 44.3 | 9.30e-05 |
| virus receptor activity | Hs | molecular function | 44.3 | 9.30e-05 |
| protease binding | Hs | molecular function | 44.3 | 9.30e-05 |
| transmembrane signaling receptor activity | Hs | molecular function | 44.3 | 8.93e-05 |
| low-density lipoprotein receptor activity | Hs | molecular function | 44.3 | 8.93e-05 |
| calcium ion binding | Hs | molecular function | 44.3 | 8.93e-05 |
| protein binding | Hs | molecular function | 44.3 | 8.93e-05 |
| extracellular region | Hs | cellular component | 44.3 | 8.93e-05 |
| extracellular space | Hs | cellular component | 44.3 | 9.30e-05 |
| intracellular | Hs | cellular component | 44.3 | 9.30e-05 |
| lysosome | Hs | cellular component | 44.3 | 9.30e-05 |
| endosome | Hs | cellular component | 44.3 | 9.30e-05 |
| early endosome | Hs | cellular component | 44.3 | 9.30e-05 |
| late endosome | Hs | cellular component | 44.3 | 9.30e-05 |
| Golgi apparatus | Hs | cellular component | 44.3 | 9.30e-05 |
| microtubule associated complex | Hs | cellular component | 44.3 | 8.93e-05 |
| plasma membrane | Hs | cellular component | 44.3 | 8.93e-05 |
| integral component of plasma membrane | Hs | cellular component | 44.3 | 9.30e-05 |
| caveola | Hs | cellular component | 44.3 | 8.93e-05 |
| clathrin-coated pit | Hs | cellular component | 44.3 | 9.30e-05 |
| high-density lipoprotein particle binding | Hs | molecular function | 44.3 | 8.93e-05 |
| external side of plasma membrane | Hs | cellular component | 44.3 | 9.30e-05 |
| cell surface | Hs | cellular component | 44.3 | 9.30e-05 |
| endosome membrane | Hs | cellular component | 44.3 | 9.30e-05 |
| postsynaptic density | Hs | cellular component | 44.3 | 8.93e-05 |
| membrane | Hs | cellular component | 44.3 | 8.93e-05 |
| integral component of membrane | Hs | cellular component | 44.3 | 8.93e-05 |
| basolateral plasma membrane | Hs | cellular component | 44.3 | 9.30e-05 |
| kinesin binding | Hs | molecular function | 44.3 | 8.93e-05 |
| low-density lipoprotein particle binding | Hs | molecular function | 44.3 | 9.30e-05 |
| very-low-density lipoprotein particle receptor activity | Hs | molecular function | 44.3 | 8.93e-05 |
| axon | Hs | cellular component | 44.3 | 8.93e-05 |
| dendrite | Hs | cellular component | 44.3 | 8.93e-05 |
| clathrin-coated endocytic vesicle membrane | Hs | cellular component | 44.3 | 9.30e-05 |
| clathrin heavy chain binding | Hs | molecular function | 44.3 | 9.30e-05 |
| apolipoprotein binding | Hs | molecular function | 44.3 | 8.93e-05 |
| low-density lipoprotein particle | Hs | cellular component | 44.3 | 9.30e-05 |
| endolysosome membrane | Hs | cellular component | 44.3 | 9.30e-05 |
| somatodendritic compartment | Hs | cellular component | 44.3 | 9.30e-05 |
| reelin receptor activity | Hs | molecular function | 44.3 | 8.93e-05 |
| identical protein binding | Hs | molecular function | 44.3 | 9.30e-05 |
| neuronal cell body | Hs | cellular component | 44.3 | 8.93e-05 |
| receptor complex | Hs | cellular component | 44.3 | 8.93e-05 |
| apical part of cell | Hs | cellular component | 44.3 | 9.30e-05 |
| sorting endosome | Hs | cellular component | 44.3 | 9.30e-05 |
| PCSK9-LDLR complex | Hs | cellular component | 44.3 | 9.30e-05 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 1.44E-9 |
