Aniseed - Gene card

Gene 'KH2012:KH.C7.147'

Gene Card

Best human hits

AP000275.2; C21orf59

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007968

Gene Model ID

KH2012:KH.C7.147

Location

KhC7:2097784..2102290

Transcript Models and Sequences

KH2012:KH.C7.147.v1.R.ND2-1
KH2012:KH.C7.147.v2.C.SL1-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000007832
NCBI Reference Sequence	XM_002127501.4
NCBI Reference Sequence	XM_009860663.2
NCBI Reference Sequence	XM_009860664.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

3 results

cibd067p07

Plate: R1CiGC38b12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
DUF2870	Pfam	Protein of unknown function DUF2870
DUF2870	PANTHER	Protein of unknown function DUF2870

GOSlim

11 results

GO Term	Annotation Origin	Type
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
cell projection	Orthology	cellular component
cell projection morphogenesis	Orthology	biological process
microtubule-based movement	Orthology	biological process
localization	Orthology	biological process
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
regulation of cilium movement	Hs	biological process
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
cilium	Hs	cellular component
cell projection	Hs	cellular component
cell projection morphogenesis	Hs	biological process
cilium assembly	Hs	biological process

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleus	Hs	cellular component	385	5.34e-136
cytoplasm	Hs	cellular component	385	5.34e-136
cytosol	Hs	cellular component	385	5.34e-136
cytoskeleton	Hs	cellular component	385	5.34e-136
cilium	Hs	cellular component	385	5.34e-136
cell projection	Hs	cellular component	385	5.34e-136

GO (InterProScan)